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Bioinformatics: Databases
The first January issue of Nucleic Acids Research annually contains new and updated database listings:
2001 listing
2000 listing
Some databases that might be useful to researchers include:
GenBank
DBCAT, The Public Catalog of Databases
EMBL Nucleotide Sequence Database
DDBJ, DNA Data Bank of Japan
COG Database, Cluster of Orthologous Groups of proteins
MIPS, Database for Genomes and Protein Sequences
PIR, Protein Information Resource
SWISS-PROT, Curated Protein Sequence Database
ProtoMap, Automatic Classification of Proteins
PDB, Protein Data Bank
PFAM, Protein Families Database
EID, Exon/Intron Database
ExInt, Exon/Intron Database
IEDB, Intron Sequence and Evolution Database
Japanese GenomeNet
KEGG, Kyoto Encyclopedia of Genes and Genomes
MitBASE, Mitochondrial Genome Database
AMmtDB, Multi-aligned Metazoa mtDNA sequences
MitoNuc/MitoAln, mtDNA/Amino Acid Multiple Alignments
MITOP, The Mitochondrial Proteome Database
GOBASE, Organelle Genome Database
PLMItRNA, database of tRNAs and tRNA genes in plant mitochondria
Ribosomal Database Project II
European Small Subunit Ribosomal RNA Database
European Large Subunit Ribosomal RNA Database
Non-coding, mRNA-like RNAs Database
PseudoBase, Database with RNA Pseudoknots
Repbase Update, refereed e-journal for eukaryotic repetitive elements
TIGR, The Institute for Genomic Research
TreeBASE, Published phylogenies and data matrices
DISCLAIMER:
The links above represent potentially useful information that viewers to this website may be interested in. The maintainers of this website do not endorse or promote these linked websites, and are not responsible for their content.
